...
- Process of copying data (
bundle_copy,copyValues). eval(imas_control.get_wrapper(item) + args)andeval(imas_control.get_wrapper(item) + args)take almost half of function time
Testing HDF5
HDF5_BACKEND_READ_CACHE - TABLE
| Markdown |
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|HDF5_BACKEND_READ_CACHE [MB] |jintrac_imas_driver |jetto_wrapper |jintrac_imas_driver |jetto_wrapper| |getslice interpolation| off | off| on |on | |----------|------------|------------|-----------|-------------| | 4 | 241.739 | 12.9481 | 230.008 | 12.136 | | 8 | 234.774 | 12.3213 | 228.837 | 12.1292 | | 12 | 168.333 | 13.0729 | 148.889 | 12.0893 | | 16 | 154.656 | 12.3905 | 152.87 | 12.3117 | | 20 | 152.988 | 12.4138 | 155.945 | 12.4595 | | 24 | 150.913 | 12.283 | 155.469 | 12.7765 | | 28 | 153.991 | 12.5123 | 153.11 | 12.3468 | | 32 | 153.903 | 12.4356 | 149.575 | 12.1548 | | 36 | 159.225 | 12.6422 | 151.492 | 12.1888 | | 40 | 149.549 | 12.2838 | 152.926 | 12.207 | | 44 | 158.385 | 12.5754 | 154.827 | 12.266 | | 48 | 153.306 | 12.3843 | 152.786 | 12.3101 | | 52 | 150.771 | 12.3464 | 151.305 | 12.1539 | | 56 | 165.846 | 13.0865 | 153.383 | 12.2905 | | 60 | 153.729 | 12.6542 | 155.563 | 12.4427 | | 64 | 161.231 | 12.5552 | 151.229 | 12.2685 | | 68 | 154.142 | 12.4402 | 148.697 | 12.0926 | | 72 | 153.52 | 12.4294 | 149.757 | 12.1072 | | 76 | 149.982 | 12.3277 | 151.765 | 12.2017 | | 80 | 155.473 | 12.6245 | 151.903 | 12.2647 | | 84 | 150.118 | 12.2872 | 152.894 | 12.2489 | | 88 | 149.918 | 12.2017 | 154.456 | 12.285 | | 92 | 151.403 | 12.317 | 149.207 | 12.0798 | | 96 | 150.825 | 12.3905 | 152.792 | 12.2197 | | 100 | 149.834 | 12.6997 | 147.859 | 12.0551 | | 104 | 150.326 | 12.3421 | 148.031 | 12.062 | | 108 | 151.51 | 12.3496 | 152.049 | 12.2785 | | 112 | 155.506 | 12.4702 | 154.526 | 12.3407 | | 116 | 153.662 | 12.4152 | 153.498 | 12.2769 | | 120 | 158.311 | 12.7339 | 148.607 | 12.1153 | | 124 | 154.864 | 12.2361 | 156.592 | 12.5044 | | 128 | 153.5 | 12.2201 | 154.231 | 13.1112 | | 132 | 152.191 | 12.3723 | 156.739 | 12.4632 | | 136 | 160.911 | 12.5815 | 152.368 | 12.3718 | | 140 | 159.165 | 12.8561 | 149.531 | 12.1498 | | 144 | 153.646 | 12.4145 | 151.239 | 12.1133 | | 148 | 149.434 | 12.3417 | 147.887 | 11.9921 | | 152 | 151.505 | 12.3484 | 151.848 | 12.4215 | | 156 | 151.068 | 12.3288 | 156.421 | 12.4458 | | 160 | 152.951 | 12.4558 | 155.213 | 12.4617 | | 164 | 149.566 | 12.2848 | 151.589 | 12.2744 | | 168 | 151.872 | 12.4422 | 151.654 | 12.4456 | | 172 | 152.766 | 12.4294 | 153.34 | 12.2264 | | 176 | 151.982 | 12.4162 | 149.911 | 12.254 | | 180 | 152.768 | 12.4248 | 156.015 | 12.3302 | | 184 | 148.166 | 12.2076 | 149.323 | 12.2971 | | 188 | 153.493 | 12.4229 | 153.415 | 13.0557 | | 192 | 153.968 | 12.3694 | 157.029 | 12.4348 | | 196 | 152.465 | 12.3764 | 154.288 | 12.2881 | | 200 | 149.238 | 12.2266 | 154.713 | 12.3013 | |
...
HDF5_BACKEND_READ_CACHE - PLOTS
TESTING MDSPLUS
LINE PROFILER
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Timer unit: 1e-06 s
Total time: 155.743 s
File: /pfs/work/g2pbloch/jintrac/python/jintrac_imas_driver.py
Function: jintrac_imas_driver at line 735
Line # Hits Time Per Hit % Time Line Contents
==============================================================
896 1 1638364.1 1638364.1 1.1 status, idx_out = DBentry.idsout.create() # idx_out points to output IDS file index
957 22 50742304.5 2306468.4 32.6 ids_bundle_input[ids_struct] = eval('DBentry.idsin.get("'+ids_struct+'")')
962 1 45878227.2 45878227.2 29.5 tmpdict = bundle_copy(ids_bundle_input)
996 2 3193050.2 1596525.1 2.1 ids_bundle_input[elem] = DBentry.idsin.get_slice(elem, tstart, interp_value)
1011 1 3399663.8 3399663.8 2.2 ids_bundle_work = bundle_copy(ids_bundle_input)
1012 1 4340984.3 4340984.3 2.8 ids_bundle_updated = bundle_copy(ids_bundle_input)
1067 3 6779104.9 2259701.6 4.4 ids_bundle_prev[item] = bundle_copy(ids_bundle_work,imas_control.get_ids_sublist_updates(item))
1199 3 25454536.5 8484845.5 16.3 ids_bundle_updated_tmp = eval(imas_control.get_wrapper(item) + args)
1105 11 4817487.6 437953.4 3.1 ids_bundle_updated[ids_struct].copyValues(ids_bundle_updated_tmp[ids_struct])
1106 11 3587909.3 326173.6 2.3 ids_bundle_prev[item][ids_struct].copyValues(ids_bundle_updated_tmp[ids_struct])
1114 1 4769085.3 4769085.3 3.1 ids_bundle_work = bundle_copy(ids_bundle_updated)
Total time: 12.4592 s
File: /pfs/work/g2pbloch/jintrac/python/jintrac_imas_driver.py
Function: jetto_wrapper at line 304
Line # Hits Time Per Hit % Time Line Contents
==============================================================
323 1 1.3 1.3 0.0 out_prof, out_src, out_trans, out_equil, out_summ, out_num, out_work \
324 1 8958798.8 8958798.8 71.9 = jetto(in_prof, in_src, in_trans, in_equil, in_nbi,
325 1 0.2 0.2 0.0 in_pel, in_pulse, in_contr, in_summ, in_num, in_work)
367 1 3459717.4 3459717.4 27.8 out_ids_bundle = bundle_copy(in_ids_bundle_work)
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